VS 2012 Saving files in AppData Folder

I have written a Visual Basic.Net application in Visual Studio 2012 Ultimate. When this application is installed to the `Program Files` folder, when files are saved, they are located in this location:

C:\Users\[Username]\AppData\Local\VirtualStore\Program Files\[Company Name]\\[Application Name]

How can I specify to save the files in the following directory:

C:\Users\[Username]\AppData\[Company Name]\\[Application Name] folder (basically, not the VirtualStore folder)?

Do I need to register this application within Windows to do this?

Thanks in advance